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Slin_0365 protein (Spirosoma linguale) - STRING interaction network
"Slin_0365" - MarR family transcriptional regulator in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0365MarR family transcriptional regulator (151 aa)    
Predicted Functional Partners:
Slin_5738
Hypothetical protein (173 aa)
   
          0.697
Slin_0793
Hypothetical protein (420 aa)
   
          0.691
Slin_1353
Hypothetical protein (219 aa)
   
          0.684
Slin_0577
Hypothetical protein (422 aa)
   
          0.681
Slin_0366
Hypothetical protein (189 aa)
              0.681
Slin_0364
Hypothetical protein (683 aa)
              0.679
Slin_5680
Hypothetical protein (125 aa)
   
          0.642
Slin_1648
Hypothetical protein (124 aa)
   
          0.641
Slin_5518
Chromosome segregation ATPase (1100 aa)
   
          0.523
Slin_4869
Xylose isomerase (310 aa)
   
          0.482
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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