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Slin_0393 protein (Spirosoma linguale) - STRING interaction network
"Slin_0393" - OmpA/MotB domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0393OmpA/MotB domain-containing protein (399 aa)    
Predicted Functional Partners:
Slin_1912
Periplasmic component of the Tol biopolymer transport system-like protein (512 aa)
 
 
  0.776
Slin_5728
OmpA/MotB domain-containing protein (294 aa)
   
 
 
  0.680
Slin_4937
Polysaccharide export protein (800 aa)
     
    0.626
Slin_2568
Ligand-binding protein (812 aa)
     
    0.626
Slin_0392
Hypothetical protein (202 aa)
              0.625
Slin_0999
Hypothetical protein (402 aa)
   
 
  0.610
Slin_5087
MotA/TolQ/ExbB proton channel (277 aa)
 
     
  0.543
Slin_0750
Response regulator receiver protein (124 aa)
   
          0.543
Slin_1395
FKBP-type peptidylprolyl isomerase (155 aa)
 
        0.529
Slin_2865
Hypothetical protein (408 aa)
   
 
  0.523
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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