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Slin_0395 protein (Spirosoma linguale) - STRING interaction network
"Slin_0395" - NIPSNAP family containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0395NIPSNAP family containing protein (262 aa)    
Predicted Functional Partners:
Slin_5811
Dehydrogenase (1040 aa)
   
          0.771
Slin_0965
Heme-binding protein (902 aa)
   
          0.746
Slin_1351
Esterase (298 aa)
   
          0.745
Slin_4998
Cytochrome C class I (756 aa)
   
          0.725
Slin_3985
Dehydrogenase (852 aa)
   
          0.708
Slin_0394
Oxidoreductase domain-containing protein (468 aa)
              0.676
Slin_3953
Quinoprotein glucose dehydrogenase (747 aa)
   
          0.664
Slin_2450
PQQ-dependent enzyme-like protein (718 aa)
   
          0.654
Slin_1132
PQQ-dependent enzyme-like protein (701 aa)
   
          0.647
Slin_1880
Blue (type 1) copper domain-containing protein (722 aa)
   
          0.636
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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