STRINGSTRING
Slin_0407 protein (Spirosoma linguale) - STRING interaction network
"Slin_0407" - Argininosuccinate synthase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0407Argininosuccinate synthase (400 aa)    
Predicted Functional Partners:
argH
Argininosuccinate lyase (445 aa)
 
 
  0.999
argC
N-acetyl-gamma-glutamyl-phosphate reductase (327 aa)
 
   
  0.999
Slin_6239
Carbamoyl-phosphate synthase large subunit (958 aa)
  0.997
Slin_0306
Peptidase M20 (360 aa)
 
  0.989
Slin_1156
Aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain-containing protein (320 aa)
 
   
  0.988
argB
Acetylglutamate kinase (260 aa)
 
   
  0.984
carA
Carbamoyl-phosphate synthase small subunit (367 aa)
 
 
  0.980
Slin_0026
Hypothetical protein (235 aa)
          0.970
Slin_4514
Aspartate kinase (818 aa)
 
 
  0.966
Slin_0568
Asparagine synthase (647 aa)
     
  0.960
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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