STRINGSTRING
Slin_0408 protein (Spirosoma linguale) - STRING interaction network
"Slin_0408" - ADP-heptose--LPS heptosyltransferase-like protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0408ADP-heptose--LPS heptosyltransferase-like protein (404 aa)    
Predicted Functional Partners:
Slin_0407
Argininosuccinate synthase (400 aa)
              0.859
Slin_5627
Anthranilate phosphoribosyltransferase-like protein (419 aa)
   
          0.751
Slin_4946
Hypothetical protein (711 aa)
   
          0.727
Slin_5230
PKD domain-containing protein (1222 aa)
   
          0.640
Slin_4309
Hypothetical protein (416 aa)
   
          0.633
argC
N-acetyl-gamma-glutamyl-phosphate reductase (327 aa)
              0.621
Slin_4221
RagB/SusD domain-containing protein (457 aa)
   
          0.616
Slin_2543
Hypothetical protein (607 aa)
   
          0.608
Slin_6416
Hypothetical protein (364 aa)
   
          0.605
Slin_1841
Hypothetical protein (438 aa)
   
          0.603
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (14%) [HD]