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Slin_0411 protein (Spirosoma linguale) - STRING interaction network
"Slin_0411" - Carbohydrate kinase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0411Carbohydrate kinase (495 aa)    
Predicted Functional Partners:
Slin_6630
6-phosphogluconate dehydrogenase (298 aa)
 
   
  0.961
Slin_4083
6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH (484 aa)
       
  0.939
Slin_3203
Gluconolactonase (342 aa)
   
 
    0.907
Slin_2519
Gluconolactonase (545 aa)
   
 
    0.907
Slin_0076
SMP-30/gluconolaconase/LRE domain-containing protein (307 aa)
   
 
    0.907
Slin_2698
6-phosphogluconolactonase (241 aa)
     
 
    0.903
Slin_5727
6-phosphogluconolactonase (373 aa)
       
    0.903
Slin_6051
FAD dependent oxidoreductase (552 aa)
   
  0.818
Slin_4070
Oxidoreductase domain-containing protein (734 aa)
   
   
  0.732
Slin_2470
Gluconate transporter (438 aa)
 
     
  0.634
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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