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Slin_0417 protein (Spirosoma linguale) - STRING interaction network
"Slin_0417" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0417Hypothetical protein (389 aa)    
Predicted Functional Partners:
ade
Adenine deaminase (551 aa)
              0.859
Slin_6152
Hypothetical protein (418 aa)
   
          0.749
Slin_0535
NIPSNAP family containing protein (267 aa)
   
          0.705
Slin_4515
Hypothetical protein (166 aa)
   
          0.681
Slin_4243
Hypothetical protein (245 aa)
   
          0.678
Slin_0416
Altronate dehydratase (582 aa)
              0.638
Slin_0958
Hypothetical protein (478 aa)
   
          0.630
Slin_5242
Inositol oxygenase (284 aa)
 
          0.598
Slin_4035
NIPSNAP family containing protein (264 aa)
   
          0.596
Slin_1351
Esterase (298 aa)
   
          0.596
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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