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Slin_0437 protein (Spirosoma linguale) - STRING interaction network
"Slin_0437" - Oxidoreductase domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0437Oxidoreductase domain-containing protein (441 aa)    
Predicted Functional Partners:
Slin_0438
Hypothetical protein (247 aa)
 
          0.787
Slin_3547
Oxidoreductase domain-containing protein (372 aa)
 
          0.668
Slin_0439
Xylose isomerase (308 aa)
 
          0.614
Slin_1925
Oxidoreductase domain-containing protein (340 aa)
 
          0.592
Slin_5816
Oxidoreductase domain-containing protein (397 aa)
 
          0.552
Slin_1698
Oxidoreductase domain-containing protein (374 aa)
 
          0.550
Slin_0358
Coagulation factor 5/8 type domain-containing protein (1114 aa)
   
          0.532
Slin_1945
alpha-L-rhamnosidase (819 aa)
   
          0.513
Slin_1257
Glycoside hydrolase family protein (1347 aa)
   
          0.507
Slin_0049
Oxidoreductase domain-containing protein (391 aa)
 
          0.498
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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