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Slin_0465 protein (Spirosoma linguale) - STRING interaction network
"Slin_0465" - Transcriptional regulator in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0465Transcriptional regulator (225 aa)    
Predicted Functional Partners:
Slin_0466
Histidine kinase (422 aa)
 
          0.972
Slin_5458
MgtC/SapB transporter (212 aa)
       
 
  0.867
Slin_4554
Histidine kinase (425 aa)
 
 
  0.846
Slin_0920
Histidine kinase (481 aa)
 
  0.813
Slin_4794
Histidine kinase (454 aa)
 
  0.812
Slin_2945
Histidine kinase (451 aa)
 
 
  0.787
Slin_3850
Response regulator receiver protein (158 aa)
   
     
  0.781
Slin_4055
Histidine kinase (455 aa)
 
  0.768
Slin_2930
Histidine kinase (468 aa)
 
  0.766
Slin_1028
Response regulator receiver protein (141 aa)
   
     
  0.763
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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