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Slin_0467 protein (Spirosoma linguale) - STRING interaction network
"Slin_0467" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0467Hypothetical protein (261 aa)    
Predicted Functional Partners:
Slin_0301
Hypothetical protein (448 aa)
   
          0.698
Slin_2426
Hypothetical protein (165 aa)
   
          0.688
Slin_0468
Hypothetical protein (76 aa)
              0.657
Slin_0505
Hypothetical protein (224 aa)
   
          0.640
Slin_0469
Peptidase S9 prolyl oligopeptidase active site domain-containing protein (638 aa)
              0.582
Slin_3994
TetR family transcriptional regulator (238 aa)
   
          0.576
Slin_1424
RagB/SusD domain-containing protein (604 aa)
   
          0.508
Slin_1763
TonB-dependent receptor plug (703 aa)
   
          0.505
Slin_3563
Cytochrome oxidase maturation protein, cbb3- type (71 aa)
   
          0.495
Slin_6502
Hypothetical protein (1691 aa)
   
          0.487
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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