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Slin_0478 protein (Spirosoma linguale) - STRING interaction network
"Slin_0478" - Siroheme synthase in Spirosoma linguale
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0478Siroheme synthase (188 aa)    
Predicted Functional Partners:
Slin_5405
uroporphyrin-III C-methyltransferase (252 aa)
 
  0.998
Slin_2052
uroporphyrin-III C-methyltransferase (266 aa)
 
  0.997
Slin_1700
Hypothetical protein (355 aa)
            0.913
Slin_3013
uroporphyrin-III C/tetrapyrrole methyltransferase (233 aa)
       
    0.900
rsmI
uroporphyrin-III C/tetrapyrrole methyltransferase; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (246 aa)
       
    0.900
Slin_3709
uroporphyrin-III C/tetrapyrrole methyltransferase (535 aa)
         
    0.900
Slin_2051
Sulfite reductase (720 aa)
 
 
  0.877
hemL
Glutamate-1-semialdehyde-2,1-aminomutase (451 aa)
   
  0.851
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps (309 aa)
 
   
  0.813
Slin_0477
NADPH-dependent FMN reductase (181 aa)
              0.805
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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