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Slin_0482 protein (Spirosoma linguale) - STRING interaction network
"Slin_0482" - Glycosyl transferase family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0482Glycosyl transferase family protein (554 aa)    
Predicted Functional Partners:
Slin_6420
Family 2 glycosyl transferase (333 aa)
   
  0.856
Slin_0212
Family 2 glycosyl transferase (331 aa)
 
   
  0.827
Slin_2952
Family 2 glycosyl transferase (305 aa)
 
   
  0.820
Slin_0291
Family 2 glycosyl transferase (312 aa)
 
   
  0.820
Slin_2410
Family 2 glycosyl transferase (331 aa)
 
   
  0.800
Slin_6418
Glycosyl transferase family protein (537 aa)
 
          0.776
Slin_5753
Family 2 glycosyl transferase (246 aa)
 
   
  0.751
Slin_4086
FAD linked oxidase (539 aa)
 
          0.686
Slin_2870
Family 2 glycosyl transferase (227 aa)
 
   
  0.627
Slin_0355
Polysaccharide deacetylase (265 aa)
 
   
  0.621
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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