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Slin_0501 protein (Spirosoma linguale) - STRING interaction network
"Slin_0501" - Exodeoxyribonuclease VII in Spirosoma linguale
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Slin_0501Exodeoxyribonuclease VII (404 aa)    
Predicted Functional Partners:
Slin_0500
Exonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (62 aa)
       
    0.930
Slin_5744
Dimethylallyltranstransferase (323 aa)
   
   
  0.645
Slin_1303
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA (557 aa)
   
   
  0.638
pheS
phenylalanyl-tRNA synthetase subunit alpha (346 aa)
   
        0.622
uvrB
Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (673 aa)
 
     
  0.608
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (510 aa)
   
   
  0.593
Slin_3006
Trans-hexaprenyltranstransferase (324 aa)
   
   
  0.588
Slin_1193
Inosine-5’-monophosphate dehydrogenase (490 aa)
   
      0.580
Slin_2937
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate (352 aa)
   
        0.573
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing (342 aa)
 
   
  0.564
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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