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Slin_0503 protein (Spirosoma linguale) - STRING interaction network
"Slin_0503" - Response regulator receiver protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0503Response regulator receiver protein (143 aa)    
Predicted Functional Partners:
Slin_4959
Hypothetical protein (315 aa)
   
          0.587
Slin_4961
Hypothetical protein (257 aa)
   
          0.579
Slin_4966
Hypothetical protein (450 aa)
   
          0.577
Slin_6549
Peptidase M28 (551 aa)
   
          0.560
Slin_6313
GumN family protein (285 aa)
   
          0.543
Slin_4962
Hypothetical protein (398 aa)
   
          0.528
Slin_0504
Response regulator receiver protein (139 aa)
 
       
0.525
Slin_3158
Hypothetical protein (857 aa)
   
          0.523
Slin_4958
RDD domain-containing protein (231 aa)
   
          0.518
Slin_2769
Glyoxalase/bleomycin resistance protein/dioxygenase (125 aa)
   
          0.515
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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