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Slin_0514 protein (Spirosoma linguale) - STRING interaction network
"Slin_0514" - tRNA/rRNA methyltransferase SpoU in Spirosoma linguale
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Slin_0514tRNA/rRNA methyltransferase SpoU (176 aa)    
Predicted Functional Partners:
rnr
Ribonuclease R; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (825 aa)
 
    0.797
Slin_0515
Hypothetical protein (183 aa)
              0.756
Slin_4091
Satase isoform II (178 aa)
   
        0.708
Slin_1590
Serine O-acetyltransferase (281 aa)
   
        0.708
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity (886 aa)
   
        0.702
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (114 aa)
 
 
  0.666
Slin_1453
Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (501 aa)
   
 
  0.643
Slin_0513
Hypothetical protein (156 aa)
              0.630
rplD
50S ribosomal protein L4; Forms part of the polypeptide exit tunnel (209 aa)
 
 
  0.613
Slin_0322
Hypothetical protein (295 aa)
 
        0.612
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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