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Slin_0521 protein (Spirosoma linguale) - STRING interaction network
"Slin_0521" - Exodeoxyribonuclease III Xth in Spirosoma linguale
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Experiments
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[Homology]
Score
Slin_0521Exodeoxyribonuclease III Xth (254 aa)    
Predicted Functional Partners:
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (215 aa)
 
 
  0.990
Slin_4204
DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity (220 aa)
 
 
  0.987
Slin_4880
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (379 aa)
     
  0.983
Slin_5983
A/G-specific adenine glycosylase (362 aa)
     
  0.979
Slin_0543
DNA polymerase I (1024 aa)
     
  0.979
Slin_1733
HhH-GPD family protein; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity (241 aa)
     
  0.978
Slin_2830
PHP domain-containing protein (577 aa)
   
  0.954
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (221 aa)
     
  0.881
Slin_2269
HhH-GPD family protein (207 aa)
   
  0.870
hisB
Histidinol-phosphatase (382 aa)
   
 
  0.701
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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