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Slin_0522 protein (Spirosoma linguale) - STRING interaction network
"Slin_0522" - Pseudouridine synthase in Spirosoma linguale
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0522Pseudouridine synthase (198 aa)    
Predicted Functional Partners:
Slin_0811
HAD-superfamily hydrolase (225 aa)
 
        0.716
Slin_0521
Exodeoxyribonuclease III Xth (254 aa)
   
        0.656
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (241 aa)
 
   
  0.624
der
Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis (435 aa)
 
   
  0.613
rlmN
Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs (349 aa)
 
      0.585
cmk
Cytidylate kinase (233 aa)
 
        0.535
Slin_5663
RNA binding S1 domain-containing protein (595 aa)
   
      0.535
Slin_1303
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA (557 aa)
 
        0.531
Slin_5247
Translation elongation factor P (187 aa)
 
      0.531
Slin_5962
KpsF/GutQ family protein (322 aa)
   
        0.519
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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