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Slin_0523 protein (Spirosoma linguale) - STRING interaction network
"Slin_0523" - DNA repair protein RadC in Spirosoma linguale
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Experiments
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[Homology]
Score
Slin_0523DNA repair protein RadC (231 aa)    
Predicted Functional Partners:
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (685 aa)
 
   
  0.814
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity (886 aa)
 
     
  0.790
Slin_2383
DNA protecting protein DprA (370 aa)
   
   
  0.618
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (88 aa)
              0.606
Slin_0543
DNA polymerase I (1024 aa)
     
 
  0.593
Slin_5592
DNA-formamidopyrimidine glycosylase (271 aa)
     
 
  0.516
Slin_0362
Maf protein (178 aa)
     
 
  0.515
Slin_3999
HAD-superfamily hydrolase (229 aa)
 
          0.506
Slin_1195
single-stranded-DNA-specific exonuclease RecJ (584 aa)
 
     
  0.500
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5’ and 3’ sides of the lesion. The N-terminal half is responsible for the 3’ incision and the C-terminal half is responsible for the 5’ incision (602 aa)
 
 
  0.498
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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