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Slin_0587 protein (Spirosoma linguale) - STRING interaction network
"Slin_0587" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0587Hypothetical protein (1393 aa)    
Predicted Functional Partners:
Slin_0586
ATPase AAA (324 aa)
 
          0.894
Slin_0585
Hypothetical protein (419 aa)
 
          0.771
Slin_5584
Hypothetical protein (451 aa)
   
          0.679
Slin_5108
Hypothetical protein (387 aa)
   
          0.619
Slin_6471
Sel1 domain-containing protein repeat-containing protein (1274 aa)
   
          0.614
Slin_3040
TonB-dependent receptor plug (1107 aa)
   
          0.588
Slin_3039
Hypothetical protein (534 aa)
   
          0.583
Slin_1363
Hypothetical protein (205 aa)
   
          0.573
Slin_1546
XisI protein (115 aa)
   
          0.502
Slin_0239
XisI protein (115 aa)
   
          0.488
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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