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Slin_0603 protein (Spirosoma linguale) - STRING interaction network
"Slin_0603" - DegT/DnrJ/EryC1/StrS aminotransferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0603DegT/DnrJ/EryC1/StrS aminotransferase (470 aa)    
Predicted Functional Partners:
Slin_0602
Hypothetical protein (453 aa)
 
          0.894
Slin_0604
Oxidoreductase domain-containing protein (327 aa)
              0.829
Slin_5687
Sugar O-acyltransferase, sialic acid O- acetyltransferase NeuD family (210 aa)
 
 
  0.697
Slin_2575
Transferase (217 aa)
 
 
  0.593
Slin_4262
UDP-N-acetylglucosamine 4,6-dehydratase (338 aa)
   
   
  0.588
Slin_2839
Oxidoreductase domain-containing protein (434 aa)
 
   
  0.587
Slin_3855
Acetyltransferase (isoleucine patch superfamily)-like protein (212 aa)
 
 
  0.581
Slin_4507
Oxidoreductase domain-containing protein (358 aa)
 
   
  0.572
Slin_3435
Oxidoreductase domain-containing protein (381 aa)
 
   
  0.569
Slin_4070
Oxidoreductase domain-containing protein (734 aa)
   
   
  0.567
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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