STRINGSTRING
Slin_0611 protein (Spirosoma linguale) - STRING interaction network
"Slin_0611" - Muconate lactonizing mandelate racemase protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0611Muconate lactonizing mandelate racemase protein (377 aa)    
Predicted Functional Partners:
Slin_0609
Dihydrodipicolinate synthetase (317 aa)
 
          0.894
Slin_0612
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein (320 aa)
              0.859
Slin_0610
Hypothetical protein (313 aa)
              0.859
Slin_0614
Creatininase (264 aa)
              0.801
Slin_0613
Endoribonuclease L-PSP (128 aa)
              0.801
Slin_6070
Galactonate dehydratase (474 aa)
   
          0.777
Slin_1934
Muconate lactonizing mandelate racemase protein (355 aa)
   
          0.776
Slin_0608
Short-chain dehydrogenase/reductase SDR (247 aa)
              0.728
Slin_6349
Muconate lactonizing mandelate racemase protein (340 aa)
   
          0.716
Slin_1535
3-oxoadipate enol-lactonase (373 aa)
 
   
  0.711
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (11%) [HD]