Automated, unsupervised textmining - searching for proteins that are frequently mentioned together.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Endoribonuclease L-PSP (128 aa)
Predicted Functional Partners:
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (702 aa)
Creatininase (264 aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein (320 aa)
Muconate lactonizing mandelate racemase protein (377 aa)
Hypothetical protein (313 aa)
Dihydrodipicolinate synthetase (317 aa)
Endoribonuclease L-PSP (134 aa)
Endoribonuclease L-PSP (156 aa)
Hypothetical protein (528 aa)
TonB-dependent receptor plug (1063 aa)
Your Current Organism:
NCBI taxonomy Id: 504472 Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74