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Slin_0637 protein (Spirosoma linguale) - STRING interaction network
"Slin_0637" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0637Hypothetical protein (1066 aa)    
Predicted Functional Partners:
Slin_1319
Hypothetical protein (110 aa)
   
          0.750
Slin_6228
RagB/SusD domain-containing protein (511 aa)
   
          0.716
Slin_2730
RagB/SusD domain-containing protein (447 aa)
   
          0.685
Slin_1135
Hypothetical protein (284 aa)
   
          0.676
Slin_0563
Hypothetical protein (86 aa)
   
          0.672
Slin_5616
Hypothetical protein (451 aa)
   
          0.663
Slin_6568
RagB/SusD domain-containing protein (502 aa)
   
          0.660
Slin_2380
Hypothetical protein (155 aa)
   
          0.631
Slin_2397
Hypothetical protein (571 aa)
   
          0.628
Slin_4800
Hypothetical protein (498 aa)
   
          0.615
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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