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Slin_0669 protein (Spirosoma linguale) - STRING interaction network
"Slin_0669" - Tex-like protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0669Tex-like protein (713 aa)    
Predicted Functional Partners:
nusG
NusG antitermination factor; Participates in transcription elongation, termination and antitermination (186 aa)
     
 
  0.760
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1449 aa)
     
 
  0.656
Slin_0670
NLP/P60 protein (207 aa)
              0.646
Slin_6629
Hypothetical protein (458 aa)
     
  0.569
Slin_6471
Sel1 domain-containing protein repeat-containing protein (1274 aa)
     
  0.569
Slin_6467
Peptidase C14 caspase catalytic subunit p20 (511 aa)
     
  0.569
Slin_6439
Histidine kinase (657 aa)
     
  0.569
Slin_5584
Hypothetical protein (451 aa)
     
  0.569
Slin_3793
Hypothetical protein (428 aa)
     
  0.569
Slin_2220
Hypothetical protein (430 aa)
     
  0.569
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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