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Slin_0693 protein (Spirosoma linguale) - STRING interaction network
"Slin_0693" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0693Hypothetical protein (372 aa)    
Predicted Functional Partners:
Slin_0696
Hypothetical protein (94 aa)
              0.859
Slin_0695
Hypothetical protein (103 aa)
              0.859
Slin_0694
Hypothetical protein (122 aa)
              0.859
Slin_4418
TonB family protein (484 aa)
   
          0.671
Slin_5627
Anthranilate phosphoribosyltransferase-like protein (419 aa)
   
          0.662
Slin_3291
Integrase family protein (450 aa)
   
          0.662
Slin_4417
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (485 aa)
   
          0.656
Slin_1970
Hypothetical protein (306 aa)
   
          0.640
Slin_4224
TonB-dependent receptor plug (1063 aa)
   
          0.638
Slin_4903
Organic solvent tolerance protein OstA-like protein (1210 aa)
   
          0.634
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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