STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0702KEGG: mxa:MXAN_0241 hypothetical protein. (81 aa)    
Predicted Functional Partners:
Slin_5218
KEGG: mch:Mchl_3369 hypothetical protein.
  
     0.750
Slin_3668
KEGG: mch:Mchl_3369 hypothetical protein.
  
     0.741
Slin_4201
KEGG: scl:sce3534 hypothetical protein.
  
     0.545
Slin_6580
KEGG: psa:PST_4013 hypothetical protein.
  
     0.522
Slin_0703
PFAM: glycoside hydrolase family 25; SMART: Glycoside hydrolase, family 25 subgroup; KEGG: ecz:ECS88_2244 putative membrane-bound hydrolase.
       0.508
Slin_6298
KEGG: tgr:Tgr7_2098 hypothetical protein.
  
     0.458
Slin_0701
Peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; Redoxin domain protein; KEGG: rpi:Rpic_0704 peroxidase.
       0.453
Slin_2197
KEGG: mxa:MXAN_4531 hypothetical protein.
  
     0.416
Slin_2639
PFAM: glycoside hydrolase family 43; KEGG: mxa:MXAN_5247 glycosy hydrolase family protein; Belongs to the glycosyl hydrolase 43 family.
  
     0.412
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.