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Slin_0733 protein (Spirosoma linguale) - STRING interaction network
"Slin_0733" - Natural resistance-associated macrophage protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0733Natural resistance-associated macrophage protein (422 aa)    
Predicted Functional Partners:
Slin_0734
Ferritin Dps family protein (157 aa)
         
  0.834
Slin_0731
Histidine kinase (455 aa)
   
 
  0.622
Slin_0738
5-oxoprolinase (1279 aa)
   
        0.617
Slin_0735
Xylose isomerase (312 aa)
              0.601
Slin_0732
Transcriptional regulator (231 aa)
   
   
  0.569
Slin_3556
ATPase P (836 aa)
   
 
  0.529
Slin_4490
Hypothetical protein (843 aa)
   
          0.519
Slin_5103
NADH-quinone oxidoreductase subunit F (446 aa)
       
      0.510
Slin_0413
5-carboxymethyl-2-hydroxymuconatedelta- isomerase (284 aa)
       
      0.510
Slin_0736
Hypothetical protein (373 aa)
              0.503
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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