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Slin_0739 protein (Spirosoma linguale) - STRING interaction network
"Slin_0739" - DeoR family transcriptional regulator in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0739DeoR family transcriptional regulator (250 aa)    
Predicted Functional Partners:
Slin_0738
5-oxoprolinase (1279 aa)
         
  0.861
Slin_0737
Hypothetical protein (136 aa)
              0.745
Slin_3541
1-phosphofructokinase (332 aa)
 
     
  0.730
Slin_0740
NUDIX hydrolase (196 aa)
              0.658
Slin_5936
Major intrinsic protein (241 aa)
 
   
  0.581
Slin_3944
LacI family transcriptional regulator (346 aa)
   
     
  0.579
Slin_6362
LacI family transcriptional regulator (349 aa)
   
     
  0.558
Slin_2686
LacI family transcriptional regulator (340 aa)
   
     
  0.555
Slin_1248
LacI family transcriptional regulator (334 aa)
   
     
  0.540
Slin_1481
LacI family transcriptional regulator (342 aa)
   
     
  0.530
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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