STRINGSTRING
Slin_0754 protein (Spirosoma linguale) - STRING interaction network
"Slin_0754" - Nitrogen specific signal transduction histidine kinase NtrB in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0754Nitrogen specific signal transduction histidine kinase NtrB (492 aa)    
Predicted Functional Partners:
Slin_5387
Transcriptional regulator (236 aa)
 
  0.818
Slin_1037
Response regulator receiver protein (247 aa)
 
  0.782
Slin_0753
Response regulator receiver protein (146 aa)
 
 
  0.767
Slin_2666
AraC family transcriptional regulator (251 aa)
 
  0.755
Slin_3615
Fis family transcriptional regulator (383 aa)
 
 
  0.739
Slin_5611
Transcriptional regulator (235 aa)
 
  0.732
Slin_0751
Fis family transcriptional regulator (490 aa)
 
 
  0.730
Slin_2490
Transcriptional regulator (244 aa)
 
 
  0.710
Slin_3143
Fis family transcriptional regulator (454 aa)
 
 
  0.688
Slin_4603
Response regulator receiver protein (132 aa)
 
          0.685
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (16%) [HD]