STRINGSTRING
Slin_0791 protein (Spirosoma linguale) - STRING interaction network
"Slin_0791" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0791Hypothetical protein (408 aa)    
Predicted Functional Partners:
Slin_0792
DNA/RNA non-specific endonuclease (356 aa)
   
        0.658
Slin_1023
FAD dependent oxidoreductase (525 aa)
 
        0.536
Slin_5344
Hydroxymethylbutenyl pyrophosphate reductase (412 aa)
 
          0.496
Slin_2661
Hypothetical protein (792 aa)
   
          0.472
Slin_4420
RNA-binding S4 domain-containing protein (638 aa)
     
      0.453
Slin_0522
Pseudouridine synthase (198 aa)
     
      0.451
Slin_1398
Hypothetical protein (799 aa)
   
          0.428
Slin_4406
ABC transporter (630 aa)
 
          0.412
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (10%) [HD]