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Slin_0792 protein (Spirosoma linguale) - STRING interaction network
"Slin_0792" - DNA/RNA non-specific endonuclease in Spirosoma linguale
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0792DNA/RNA non-specific endonuclease (356 aa)    
Predicted Functional Partners:
Slin_5941
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (526 aa)
     
 
  0.735
Slin_0791
Hypothetical protein (408 aa)
   
        0.658
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (510 aa)
     
        0.528
Slin_2215
Nuclease A inhibitor (146 aa)
     
      0.527
Slin_3827
Hypothetical protein (292 aa)
     
      0.519
rnz
Beta-lactamase; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (320 aa)
     
      0.519
Slin_0543
DNA polymerase I (1024 aa)
     
 
  0.509
Slin_4551
Antibiotic biosynthesis monooxygenase (99 aa)
   
          0.469
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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