STRINGSTRING
Slin_0805 protein (Spirosoma linguale) - STRING interaction network
"Slin_0805" - ATPase AAA in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0805ATPase AAA (320 aa)    
Predicted Functional Partners:
Slin_6105
Hypothetical protein (287 aa)
 
   
  0.847
Slin_1323
Hypothetical protein (283 aa)
 
     
  0.821
Slin_4278
Hypothetical protein (303 aa)
 
     
  0.801
Slin_6107
Von Willebrand factor A (359 aa)
 
        0.679
Slin_0806
PpiC-type peptidyl-prolyl cis-trans isomerase (458 aa)
              0.679
Slin_2667
Von Willebrand factor A (320 aa)
 
        0.677
Slin_0807
PpiC-type peptidyl-prolyl cis-trans isomerase (797 aa)
              0.579
Slin_4966
Hypothetical protein (450 aa)
 
   
  0.479
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (8%) [HD]