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Slin_0810 protein (Spirosoma linguale) - STRING interaction network
"Slin_0810" - Agmatine deiminase in Spirosoma linguale
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0810Agmatine deiminase (353 aa)    
Predicted Functional Partners:
Slin_2560
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (291 aa)
   
  0.997
Slin_5527
Orn/DAP/Arg decarboxylase 2 (494 aa)
       
  0.946
Slin_0662
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (335 aa)
 
     
  0.693
Slin_3448
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (321 aa)
     
  0.659
Slin_0811
HAD-superfamily hydrolase (225 aa)
              0.564
Slin_1649
Nitrilase (301 aa)
 
     
  0.559
Slin_5432
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (273 aa)
 
     
  0.544
Slin_0809
Hypothetical protein (112 aa)
              0.532
Slin_1728
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (535 aa)
 
     
  0.503
Slin_0640
NAD+ synthetase (700 aa)
         
  0.481
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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