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Slin_0847 protein (Spirosoma linguale) - STRING interaction network
"Slin_0847" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0847Hypothetical protein (307 aa)    
Predicted Functional Partners:
Slin_1584
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen (154 aa)
   
        0.735
Slin_0977
Peroxiredoxin (149 aa)
   
        0.735
Slin_5849
Hypothetical protein (282 aa)
   
        0.668
Slin_1131
NAD-dependent epimerase/dehydratase (315 aa)
     
        0.648
Slin_0600
Deoxyribodipyrimidine photo-lyase (561 aa)
 
   
  0.561
Slin_6186
DASH family cryptochrome (487 aa)
 
   
  0.551
Slin_5941
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (526 aa)
   
        0.539
rpmI
50S ribosomal protein L35 (64 aa)
     
        0.535
Slin_0029
Deoxyribodipyrimidine photo-lyase (438 aa)
   
   
  0.493
Slin_0849
IstB domain-containing protein ATP-binding protein (247 aa)
              0.472
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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