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Slin_0852 protein (Spirosoma linguale) - STRING interaction network
"Slin_0852" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0852Hypothetical protein (216 aa)    
Predicted Functional Partners:
Slin_0851
Crp/Fnr family transcriptional regulator (199 aa)
              0.625
Slin_6245
phytanoyl-CoA dioxygenase (320 aa)
   
          0.567
Slin_1319
Hypothetical protein (110 aa)
   
          0.544
Slin_4317
Hypothetical protein (620 aa)
   
          0.541
Slin_0519
Hypothetical protein (239 aa)
   
          0.508
Slin_2781
Hypothetical protein (112 aa)
   
          0.500
Slin_3164
Hypothetical protein (534 aa)
   
          0.493
Slin_3338
Glycoside hydrolase family protein (382 aa)
   
          0.470
Slin_0853
AraC family transcriptional regulator (198 aa)
              0.453
Slin_3951
RagB/SusD domain-containing protein (491 aa)
   
          0.423
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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