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Slin_0865 protein (Spirosoma linguale) - STRING interaction network
"Slin_0865" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0865Hypothetical protein (151 aa)    
Predicted Functional Partners:
Slin_6373
FAD linked oxidase (448 aa)
   
          0.590
Slin_0866
ECF subfamily RNA polymerase sigma-24 subunit (211 aa)
              0.579
Slin_4952
Hypothetical protein (198 aa)
   
          0.523
Slin_6095
Hypothetical protein (129 aa)
   
          0.480
Slin_1844
Sodium/hydrogen exchanger (410 aa)
   
          0.466
Slin_4409
MarR family transcriptional regulator (161 aa)
   
          0.461
Slin_0867
anti-FecI sigma factor FecR (372 aa)
              0.461
Slin_2243
Intradiol ring-cleavage dioxygenase (250 aa)
   
          0.448
Slin_3046
Aldose 1-epimerase (345 aa)
   
          0.444
Slin_2920
Type 12 methyltransferase (195 aa)
   
          0.417
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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