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Slin_0891 protein (Spirosoma linguale) - STRING interaction network
"Slin_0891" - Family 2 glycosyl transferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0891Family 2 glycosyl transferase (257 aa)    
Predicted Functional Partners:
Slin_0892
Hypothetical protein (327 aa)
              0.859
Slin_0893
Hypothetical protein (251 aa)
              0.712
Slin_6302
Family 2 glycosyl transferase (312 aa)
   
          0.696
Slin_0890
ABC transporter (771 aa)
              0.689
Slin_0889
Hypothetical protein (244 aa)
              0.689
Slin_4814
Family 2 glycosyl transferase (308 aa)
   
          0.681
Slin_2458
Family 2 glycosyl transferase (340 aa)
   
          0.640
Slin_5383
Family 2 glycosyl transferase (304 aa)
   
          0.633
Slin_2465
Family 2 glycosyl transferase (350 aa)
   
          0.626
Slin_2461
Family 2 glycosyl transferase (289 aa)
   
          0.614
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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