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Slin_0894 protein (Spirosoma linguale) - STRING interaction network
"Slin_0894" - 2OG-Fe(II) oxygenase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_08942OG-Fe(II) oxygenase (328 aa)    
Predicted Functional Partners:
Slin_0895
TonB-dependent receptor plug (806 aa)
              0.724
Slin_2725
Redoxin (168 aa)
   
    0.695
Slin_6383
Thioredoxin (101 aa)
     
    0.654
Slin_6023
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen (206 aa)
     
    0.654
Slin_5957
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen (378 aa)
     
    0.654
Slin_4777
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen (378 aa)
     
    0.654
Slin_1882
KaiB domain-containing protein (106 aa)
     
    0.654
Slin_1875
Hypothetical protein (147 aa)
     
    0.654
Slin_1863
Redoxin (409 aa)
     
    0.654
Slin_1597
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen (650 aa)
     
    0.654
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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