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Slin_0934 protein (Spirosoma linguale) - STRING interaction network
"Slin_0934" - Peptidyl-dipeptidase Dcp in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0934Peptidyl-dipeptidase Dcp (714 aa)    
Predicted Functional Partners:
Slin_0933
PadR family transcriptional regulator (112 aa)
              0.479
Slin_0935
Hypothetical protein (785 aa)
              0.476
Slin_0980
Peptidase M48 Ste24p (275 aa)
     
      0.444
Slin_0489
Peptidase M48 Ste24p (256 aa)
     
      0.444
Slin_1533
3-oxoacid CoA-transferase subunit B (447 aa)
   
 
      0.431
Slin_0521
Exodeoxyribonuclease III Xth (254 aa)
   
        0.406
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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