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Slin_0939 protein (Spirosoma linguale) - STRING interaction network
"Slin_0939" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0939Hypothetical protein (770 aa)    
Predicted Functional Partners:
Slin_4588
RND family efflux transporter MFP subunit (415 aa)
 
          0.860
Slin_4589
ABC transporter (225 aa)
 
          0.835
Slin_4582
Histidine kinase (455 aa)
 
          0.787
Slin_2352
RND family efflux transporter MFP subunit (419 aa)
   
          0.599
Slin_0938
AraC family transcriptional regulator (293 aa)
              0.509
Slin_4506
Hypothetical protein (436 aa)
   
          0.506
Slin_0940
PadR family transcriptional regulator (108 aa)
              0.481
Slin_1201
ABC transporter (228 aa)
 
          0.405
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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