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Slin_0943 protein (Spirosoma linguale) - STRING interaction network
"Slin_0943" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0943Hypothetical protein (802 aa)    
Predicted Functional Partners:
Slin_4588
RND family efflux transporter MFP subunit (415 aa)
 
          0.779
Slin_4582
Histidine kinase (455 aa)
   
          0.759
Slin_4589
ABC transporter (225 aa)
 
          0.750
Slin_0944
Hypothetical protein (803 aa)
 
       
0.698
Slin_4506
Hypothetical protein (436 aa)
   
          0.591
Slin_2352
RND family efflux transporter MFP subunit (419 aa)
   
          0.487
Slin_1201
ABC transporter (228 aa)
   
          0.438
Slin_4653
Hypothetical protein (413 aa)
   
          0.433
Slin_2348
Hypothetical protein (384 aa)
   
          0.431
Slin_0946
Hypothetical protein (811 aa)
 
       
0.408
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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