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Slin_0972 protein (Spirosoma linguale) - STRING interaction network
"Slin_0972" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0972Hypothetical protein (150 aa)    
Predicted Functional Partners:
Slin_0973
Hypothetical protein (154 aa)
              0.842
Slin_0974
ECF subfamily RNA polymerase sigma-24 subunit (190 aa)
              0.738
Slin_2312
Hypothetical protein (526 aa)
   
          0.647
Slin_5231
Hypothetical protein (343 aa)
   
          0.584
Slin_2799
Thiamine pyrophosphokinase (220 aa)
   
          0.546
Slin_2478
Hypothetical protein (473 aa)
   
          0.538
Slin_5341
Hypothetical protein (300 aa)
   
          0.528
Slin_2966
PKD domain-containing protein (531 aa)
   
          0.521
Slin_3158
Hypothetical protein (857 aa)
   
          0.518
Slin_0975
Transketolase (317 aa)
              0.516
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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