STRINGSTRING
Slin_0980 protein (Spirosoma linguale) - STRING interaction network
"Slin_0980" - Peptidase M48 Ste24p in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0980Peptidase M48 Ste24p (275 aa)    
Predicted Functional Partners:
Slin_0979
Fumarylacetoacetate hydrolase (212 aa)
   
        0.570
Slin_0762
OmpA/MotB domain-containing protein (236 aa)
   
   
  0.506
Slin_1729
Threonine aldolase (343 aa)
       
      0.485
Slin_4097
OmpA/MotB domain-containing protein (285 aa)
   
   
  0.465
Slin_0978
Peptidase M23 (689 aa)
   
        0.459
Slin_5203
OmpA/MotB domain-containing protein (668 aa)
   
   
  0.455
Slin_1304
Hypothetical protein (301 aa)
   
          0.450
Slin_6268
Nitric oxide synthase NOS (1524 aa)
     
      0.449
Slin_1730
OmpA/MotB domain-containing protein (322 aa)
   
   
  0.449
Slin_1858
Oligopeptidase A (709 aa)
     
      0.444
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (8%) [HD]