STRINGSTRING
Slin_0983 protein (Spirosoma linguale) - STRING interaction network
"Slin_0983" - DoxX family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0983DoxX family protein (142 aa)    
Predicted Functional Partners:
Slin_1424
RagB/SusD domain-containing protein (604 aa)
   
          0.748
Slin_4086
FAD linked oxidase (539 aa)
   
          0.736
Slin_3419
RagB/SusD domain-containing protein (521 aa)
   
          0.664
Slin_3421
RagB/SusD domain-containing protein (521 aa)
   
          0.657
Slin_6450
RagB/SusD domain-containing protein (493 aa)
   
          0.641
Slin_4207
RagB/SusD domain-containing protein (451 aa)
   
          0.621
Slin_2627
TonB-dependent receptor plug (1117 aa)
   
          0.607
Slin_2626
RagB/SusD domain-containing protein (507 aa)
   
          0.606
Slin_5007
Hypothetical protein (568 aa)
   
          0.601
Slin_4998
Cytochrome C class I (756 aa)
   
          0.573
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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