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Slin_0995 protein (Spirosoma linguale) - STRING interaction network
"Slin_0995" - Hypothetical protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0995Hypothetical protein (262 aa)    
Predicted Functional Partners:
Slin_0996
Hypothetical protein (469 aa)
              0.632
Slin_0997
Hypothetical protein (48 aa)
              0.602
Slin_5748
G-D-S-L family lipolytic protein (222 aa)
   
          0.531
tgt
Queuine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis- dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) (376 aa)
 
          0.525
rbfA
Ribosome-binding factor A; Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5’-terminal helix region of 16S rRNA (126 aa)
              0.471
Slin_0951
N-(5 -phosphoribosyl)anthranilate isomerase (211 aa)
   
          0.459
Slin_5676
Hypothetical protein (107 aa)
   
          0.445
Slin_4737
Hypothetical protein (131 aa)
   
          0.439
Slin_2689
Hypothetical protein (339 aa)
   
          0.435
Slin_6388
Hypothetical protein (73 aa)
   
          0.428
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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