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Slin_1005 protein (Spirosoma linguale) - STRING interaction network
"Slin_1005" - 6-pyruvoyl-tetrahydropterin synthase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_10056-pyruvoyl-tetrahydropterin synthase (143 aa)    
Predicted Functional Partners:
folE
GTP cyclohydrolase I (241 aa)
   
 
  0.999
Slin_3450
6-pyruvoyl-tetrahydropterin synthase (138 aa)
   
   
 
0.907
Slin_5893
Hypothetical protein (340 aa)
         
    0.900
Slin_0226
Phosphodiesterase/alkaline phosphatase D (471 aa)
         
    0.900
queE
Organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds (216 aa)
 
     
  0.642
Slin_1007
Short-chain dehydrogenase/reductase SDR (233 aa)
              0.538
Slin_1116
Alanine racemase domain-containing protein (219 aa)
 
          0.466
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (436 aa)
       
      0.448
Slin_2317
Dihydropteroate synthase (286 aa)
   
   
  0.444
Slin_4404
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase (159 aa)
         
  0.442
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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