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Slin_1020 protein (Spirosoma linguale) - STRING interaction network
"Slin_1020" - Acriflavin resistance protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1020Acriflavin resistance protein (1037 aa)    
Predicted Functional Partners:
Slin_1021
RND family efflux transporter MFP subunit (390 aa)
 
 
  0.989
Slin_2361
RND family efflux transporter MFP subunit (372 aa)
 
  0.977
Slin_6592
RND family efflux transporter MFP subunit (378 aa)
 
  0.961
Slin_0822
RND family efflux transporter MFP subunit (390 aa)
 
  0.953
Slin_2947
RND family efflux transporter MFP subunit (363 aa)
 
  0.942
Slin_1203
Outer membrane efflux protein (497 aa)
   
  0.886
Slin_4438
RND family efflux transporter MFP subunit (363 aa)
 
   
  0.777
Slin_2557
RND family efflux transporter MFP subunit (356 aa)
 
   
  0.765
Slin_5505
RND family efflux transporter MFP subunit (375 aa)
 
   
  0.722
Slin_6009
RND family efflux transporter MFP subunit (356 aa)
 
   
  0.712
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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