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Slin_1028 protein (Spirosoma linguale) - STRING interaction network
"Slin_1028" - Response regulator receiver protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1028Response regulator receiver protein (141 aa)    
Predicted Functional Partners:
Slin_2508
PAS/PAC sensor hybrid histidine kinase (784 aa)
 
  0.885
Slin_0512
Histidine kinase (303 aa)
 
  0.884
Slin_5388
Histidine kinase (651 aa)
 
 
  0.874
Slin_3714
Histidine kinase (438 aa)
 
  0.854
Slin_3829
PAS/PAC sensor signal transduction histidine kinase (475 aa)
 
  0.854
Slin_5610
Histidine kinase (344 aa)
 
  0.853
Slin_3394
PAS/PAC sensor signal transduction histidine kinase (728 aa)
 
  0.850
Slin_1659
PAS/PAC sensor signal transduction histidine kinase (1043 aa)
 
 
  0.848
Slin_0386
PAS/PAC sensor signal transduction histidine kinase (674 aa)
 
 
  0.847
Slin_0618
Multi-sensor signal transduction histidine kinase (1484 aa)
 
 
  0.847
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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