STRINGSTRING
Slin_1048 protein (Spirosoma linguale) - STRING interaction network
"Slin_1048" - Inner-membrane translocator in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1048Inner-membrane translocator (328 aa)    
Predicted Functional Partners:
Slin_1047
Periplasmic binding protein/LacI transcriptional regulator (317 aa)
 
  0.997
Slin_1049
ABC transporter (496 aa)
 
  0.997
Slin_2649
Ribokinase (319 aa)
 
   
  0.876
Slin_1088
PfkB domain-containing protein (315 aa)
 
   
  0.698
Slin_6362
LacI family transcriptional regulator (349 aa)
 
   
  0.643
Slin_2686
LacI family transcriptional regulator (340 aa)
 
   
  0.640
Slin_3944
LacI family transcriptional regulator (346 aa)
 
   
  0.638
Slin_1481
LacI family transcriptional regulator (342 aa)
 
   
  0.620
Slin_1248
LacI family transcriptional regulator (334 aa)
 
   
  0.617
Slin_0439
Xylose isomerase (308 aa)
 
          0.609
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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