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Slin_1056 protein (Spirosoma linguale) - STRING interaction network
"Slin_1056" - Mannitol dehydrogenase domain-containing protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1056Mannitol dehydrogenase domain-containing protein (513 aa)    
Predicted Functional Partners:
Slin_1060
Glucuronate isomerase (470 aa)
 
 
  0.989
Slin_4785
Altronate dehydratase (551 aa)
 
   
  0.987
Slin_0416
Altronate dehydratase (582 aa)
 
   
  0.987
Slin_4786
Glucuronate isomerase (477 aa)
 
 
  0.986
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate (286 aa)
 
     
  0.815
Slin_1247
Mannitol dehydrogenase domain-containing protein (525 aa)
   
   
 
0.814
Slin_1024
Glycoside hydrolase family protein (644 aa)
 
          0.794
Slin_1059
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate (399 aa)
 
   
  0.793
Slin_1057
PfkB domain-containing protein (330 aa)
 
     
  0.777
Slin_4784
Glycoside hydrolase family protein (551 aa)
 
          0.725
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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